NiftiToDicom … This plugin imports image from nifti file to Osirix database.Intended to be used as an interface between Osirix and many tools developed to work with nifti format, such as FSL. Exporter … exports/loads DICOM images to/from nifti image and saves the current view to the database.DTIMap … calculates Fractional Anisotropy (FA), Mean diffusivity, radial and axial diffusivity and color coded FA maps from DTI images.PetSpectFusion … automatic registration of cardiac PET and SPECT images based upon the ITK Framework.A fourth algorithm was developed using the ITK framework, gradient threshold. Osirix Segmentation Tool… The user interface has support for three standard ITK region growing algorithms: connected threshold, neighborhood connected threshold and confidence connected.Here are simple instructions and a simple script, im2osirix.m. MatlabToOsirix … It is quite easy to transfer 3D images from Matlab to Osirix.ImageToMatlab … After selecting a series and the 2D/3D viewer, ugin will save a simple image file that you can read into Matlab using read3dfloats.m.2004 Dec 52(6):1342-50) and probably for phase-sensitive inversion recovery imaging (Kellman et al., Magn Reson Med. This can also be used for 2-point Dixon imaging (Moriguchi et al., Magn Reson Med. RGPhaseCorr … is a plugin implantation for taking I & Q images from a FIESTA acquisition and separating water and fat using phase-sensitive SSFP.

CreateROIMask … convert an Osirix ROI into a binary image in Analyze format.Features include: basic implants shape polygon ROIs drawing, implant ROI diameter automatic calculation based upon image analysis algorithm, ROIs are associated with each transverse section position, extended zooming in the transverse view, pilot drill volumes for 3D surface rendering and implant numbering Dental 3D Plugin … extends the OsiriX 3D Curved MPR Viewer features to allow the user to perform basic dental implant treatment planning.It can also do direct (straight) 3D measures. Surface Length 3D … uses surface rendering and creates paths over those surfaces, measuring it.Make sure to check out the plugins, which are directly available over the OsiriX plugin manager. If you think a site is missing, write it into the comments and I will add it.

This pages will list not only my plugins, but internet sites from other plugin programmers as well.

Osirix lite tutorials